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1:112309123 C / A


Filter Status
PASS
dbSNP
rs197414
Allele Frequency
0.1274
Filtering AF
0.3715 (African)
Allele Count
15445 / 121268
UCSC
1-112309123-C-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8331 66670 492 0.125
East Asian 15 8652 0 0.001734
Other 88 908 5 0.09692
African 3946 10344 716 0.3815
Latino 653 11572 15 0.05643
South Asian 1480 16510 76 0.08964
European (Finnish) 932 6612 69 0.141
Total 15445 121268 1373 0.1274

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.