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1:11308007 C / T


Filter Status
PASS
dbSNP
rs35903812
Allele Frequency
0.002689
Filtering AF
0.003668 (European (Non-Finnish))
Allele Count
326 / 121228
UCSC
1-11308007-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 271 66658 1 0.004066
East Asian 0 8652 0 0
Other 4 908 0 0.004405
African 3 10348 0 0.0002899
Latino 29 11566 0 0.002507
South Asian 15 16482 0 0.0009101
European (Finnish) 4 6614 0 0.0006048
Total 326 121228 1 0.002689

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.