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1:115236057 G / A


Filter Status
PASS
dbSNP
rs17602729
Allele Frequency
0.08714
Filtering AF
0.1242 (European (Non-Finnish))
Allele Count
10563 / 121218
UCSC
1-115236057-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8430 66686 566 0.1264
East Asian 0 8654 0 0
Other 84 904 5 0.09292
African 211 10276 3 0.02053
Latino 469 11576 11 0.04051
South Asian 588 16510 24 0.03561
European (Finnish) 781 6612 52 0.1181
Total 10563 121218 661 0.08714

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.