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1:11854457 G / A


Filter Status
PASS
dbSNP
rs4846051
Allele Frequency
0.9697
Filtering AF
0.991 (European (Non-Finnish))
Allele Count
117722 / 121406
UCSC
1-11854457-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 9 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 66563 66738 33195 0.9974
East Asian 8645 8654 4318 0.999
Other 892 906 441 0.9845
African 7110 10404 2451 0.6834
Latino 11399 11578 5612 0.9845
South Asian 16499 16512 8243 0.9992
European (Finnish) 6614 6614 3307 1
Total 117722 121406 57567 0.9697

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.