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1:11856276 A / T


Filter Status
PASS
dbSNP
rs373398993
Allele Frequency
1.655e-05
Filtering AF
3.4e-05 (African)
Allele Count
2 / 120822
UCSC
1-11856276-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 0 66424 0 0
East Asian 0 8644 0 0
Other 0 902 0 0
African 2 10400 0 0.0001923
Latino 0 11568 0 0
South Asian 0 16270 0 0
European (Finnish) 0 6614 0 0
Total 2 120822 0 1.655e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.