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1:11856378 G / A


Filter Status
PASS
dbSNP
rs1801133
Allele Frequency
0.3037
Filtering AF
0.5032 (Latino)
Allele Count
36864 / 121396
UCSC
1-11856378-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23025 66730 4099 0.345
East Asian 2640 8650 441 0.3052
Other 278 908 48 0.3062
African 1169 10404 65 0.1124
Latino 5952 11578 1597 0.5141
South Asian 2327 16512 200 0.1409
European (Finnish) 1473 6614 174 0.2227
Total 36864 121396 6624 0.3037

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.