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1:11860307 C / T


Filter Status
PASS
dbSNP
rs574132670
Allele Frequency
7.413e-05
Filtering AF
0.000198 (South Asian)
Allele Count
9 / 121412
UCSC
1-11860307-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 66740 0 2.997e-05
East Asian 0 8654 0 0
Other 0 908 0 0
African 0 10406 0 0
Latino 0 11578 0 0
South Asian 7 16512 0 0.0004239
European (Finnish) 0 6614 0 0
Total 9 121412 0 7.413e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.