Interested in working on the development of this resource? Apply here.

1:11907430 T / G


Filter Status
PASS
dbSNP
rs61757261
Allele Frequency
0.001911
Filtering AF
0.002475 (European (Non-Finnish))
Allele Count
230 / 120350
UCSC
1-11907430-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 186 66306 0 0.002805
East Asian 0 8636 0 0
Other 1 898 0 0.001114
African 5 9828 0 0.0005088
Latino 18 11566 0 0.001556
South Asian 19 16504 1 0.001151
European (Finnish) 1 6612 0 0.0001512
Total 230 120350 1 0.001911

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.