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1:154437896 T / C


Filter Status
PASS
dbSNP
rs2229238
Allele Frequency
0.7975
Filtering AF
0.8307 (East Asian)
Allele Count
94901 / 118992
UCSC
1-154437896-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 52315 65278 20998 0.8014
East Asian 7296 8614 3099 0.847
Other 708 900 280 0.7867
African 7618 9608 3022 0.7929
Latino 9615 11518 3992 0.8348
South Asian 12856 16464 5068 0.7809
European (Finnish) 4493 6610 1528 0.6797
Total 94901 118992 37987 0.7975

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.