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1:155106227 A / T


Filter Status
PASS
dbSNP
rs4745
Allele Frequency
0.4485
Filtering AF
0.531 (European (Non-Finnish))
Allele Count
54430 / 121364
UCSC
1-155106227-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 18 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 35737 66716 9607 0.5357
East Asian 1695 8642 176 0.1961
Other 428 908 108 0.4714
African 1757 10404 157 0.1689
Latino 3658 11572 600 0.3161
South Asian 7767 16510 1868 0.4704
European (Finnish) 3388 6612 870 0.5124
Total 54430 121364 13386 0.4485

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.