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1:155210420 C / T


Filter Status
VQSRTrancheSNP99.80to99.90
dbSNP
rs104886460
Allele Frequency
0.0001154
Filtering AF
8.1e-05 (European (Non-Finnish))
Allele Count
14 / 121336
UCSC
1-155210420-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10 66698 0 0.0001499
East Asian 2 8642 0 0.0002314
Other 0 908 0 0
African 0 10388 0 0
Latino 2 11576 0 0.0001728
South Asian 0 16510 0 0
European (Finnish) 0 6614 0 0
Total 14 121336 0 0.0001154

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.