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1:156025096 C / T


Filter Status
PASS
dbSNP
rs7541
Allele Frequency
0.1203
Filtering AF
0.1571 (European (Non-Finnish))
Allele Count
14595 / 121316
UCSC
1-156025096-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10646 66670 886 0.1597
East Asian 3 8648 0 0.0003469
Other 129 904 9 0.1427
African 535 10396 9 0.05146
Latino 969 11572 53 0.08374
South Asian 1325 16512 60 0.08024
European (Finnish) 988 6614 68 0.1494
Total 14595 121316 1085 0.1203

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.