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1:156108510 C / T


Filter Status
PASS
dbSNP
rs142000963
Allele Frequency
0.001243
Filtering AF
0.001406 (European (Non-Finnish))
Allele Count
145 / 116680
UCSC
1-156108510-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 106 63724 0 0.001663
East Asian 0 8540 0 0
Other 0 862 0 0
African 7 9554 0 0.0007327
Latino 4 11402 0 0.0003508
South Asian 27 16410 1 0.001645
European (Finnish) 1 6188 0 0.0001616
Total 145 116680 1 0.001243

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.