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1:161479745 A / G


Filter Status
PASS
dbSNP
rs1801274
Allele Frequency
0.4791
Filtering AF
0.534 (African)
Allele Count
58144 / 121362
UCSC
1-161479745-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 14 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 32979 66734 8304 0.4942
East Asian 2827 8634 441 0.3274
Other 412 908 95 0.4537
African 5680 10406 1523 0.5458
Latino 6030 11572 1562 0.5211
South Asian 6856 16508 1461 0.4153
European (Finnish) 3360 6600 875 0.5091
Total 58144 121362 14261 0.4791

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.