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1:169510348 T / C


Filter Status
PASS
dbSNP
rs1800595
Allele Frequency
0.06117
Filtering AF
0.08606 (Latino)
Allele Count
7404 / 121044
UCSC
1-169510348-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4164 66508 147 0.06261
East Asian 316 8638 7 0.03658
Other 69 908 6 0.07599
African 84 10368 1 0.008102
Latino 1045 11532 60 0.09062
South Asian 1161 16484 54 0.07043
European (Finnish) 565 6606 27 0.08553
Total 7404 121044 302 0.06117

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.