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1:169519049 T / C

Warning! This variant is found in phase with 1-169519050-G-A in 1 individuals, altering its functional interpretation
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Filter Status
PASS
dbSNP
rs6025
Allele Frequency
0.9785
Filtering AF
0.9823 (East Asian)
Allele Count
118714 / 121322
UCSC
1-169519049-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 64629 66714 31307 0.9687
East Asian 8618 8618 4309 1
Other 880 906 429 0.9713
African 10358 10404 5156 0.9956
Latino 11493 11564 5712 0.9939
South Asian 16267 16510 8016 0.9853
European (Finnish) 6469 6606 3168 0.9793
Total 118714 121322 58097 0.9785

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.