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1:17674537 C / A

Warning! This variant is found in phase with 1-17674535-C-T in 1 individuals, altering its functional interpretation
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Filter Status
PASS
dbSNP
rs2240335
Allele Frequency
0.3895
Filtering AF
0.5732 (East Asian)
Allele Count
47031 / 120734
UCSC
1-17674537-C-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23536 66386 4218 0.3545
East Asian 5050 8608 1505 0.5867
Other 343 904 66 0.3794
African 3853 10352 698 0.3722
Latino 4771 11500 1017 0.4149
South Asian 7202 16410 1646 0.4389
European (Finnish) 2276 6574 376 0.3462
Total 47031 120734 9526 0.3895

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.