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1:183542387 T / C


Filter Status
PASS
dbSNP
rs2274064
Allele Frequency
0.4895
Filtering AF
0.645 (Latino)
Allele Count
59410 / 121372
UCSC
1-183542387-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 30577 66734 7092 0.4582
East Asian 5425 8630 1687 0.6286
Other 432 908 97 0.4758
African 3773 10406 687 0.3626
Latino 7605 11570 2543 0.6573
South Asian 8458 16512 2234 0.5122
European (Finnish) 3140 6612 735 0.4749
Total 59410 121372 15075 0.4895

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.