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1:183616884 C / T


Filter Status
PASS
dbSNP
rs10911390
Allele Frequency
0.04606
Filtering AF
0.1541 (African)
Allele Count
5588 / 121326
UCSC
1-183616884-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

missense non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1780 66680 25 0.02669
East Asian 628 8652 30 0.07258
Other 43 908 4 0.04736
African 1670 10402 111 0.1605
Latino 181 11572 0 0.01564
South Asian 1093 16498 43 0.06625
European (Finnish) 193 6614 2 0.02918
Total 5588 121326 215 0.04606

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.