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1:196659237 C / T


Filter Status
PASS
dbSNP
rs1061170
Allele Frequency
0.6721
Filtering AF
0.9334 (East Asian)
Allele Count
80806 / 120234
UCSC
1-196659237-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 40747 66052 12485 0.6169
East Asian 8126 8548 3867 0.9506
Other 593 900 203 0.6589
African 6530 10354 2037 0.6307
Latino 9618 11372 4097 0.8458
South Asian 11546 16476 4062 0.7008
European (Finnish) 3646 6532 1017 0.5582
Total 80806 120234 27768 0.6721

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.