Interested in working on the development of this resource? Apply here.

1:21887620 G / C


Filter Status
PASS
dbSNP
rs121918003
Allele Frequency
2.016e-05
Filtering AF
6e-06 (European (Non-Finnish))
Allele Count
2 / 99216
UCSC
1-21887620-G-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 54882 0 3.644e-05
East Asian 0 7498 0 0
Other 0 686 0 0
African 0 8048 0 0
Latino 0 9578 0 0
South Asian 0 13570 0 0
European (Finnish) 0 4954 0 0
Total 2 99216 0 2.016e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.