Interested in working on the development of this resource? Apply here.

1:21896819 C / T


Filter Status
PASS
dbSNP
rs121918020
Allele Frequency
1.654e-05
Filtering AF
5e-06 (European (Non-Finnish))
Allele Count
2 / 120902
UCSC
1-21896819-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 66468 0 3.009e-05
East Asian 0 8612 0 0
Other 0 902 0 0
African 0 10340 0 0
Latino 0 11538 0 0
South Asian 0 16462 0 0
European (Finnish) 0 6580 0 0
Total 2 120902 0 1.654e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.