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1:236911044 C / T


Filter Status
PASS
dbSNP
rs200248944
Allele Frequency
0.0002198
Filtering AF
0.000228 (European (Non-Finnish))
Allele Count
26 / 118266
UCSC
1-236911044-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 22 65134 0 0.0003378
East Asian 0 8538 0 0
Other 0 888 0 0
African 0 10104 0 0
Latino 3 11286 0 0.0002658
South Asian 0 15816 0 0
European (Finnish) 1 6500 0 0.0001538
Total 26 118266 0 0.0002198

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.