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1:40555167 G / A

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs137852700
Allele Frequency
0.0001732
Filtering AF
0.000198 (European (Non-Finnish))
Allele Count
21 / 121256
UCSC
1-40555167-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 20 66670 0 0.0003
East Asian 0 8644 0 0
Other 0 904 0 0
African 1 10384 0 9.63e-05
Latino 0 11554 0 0
South Asian 0 16488 0 0
European (Finnish) 0 6612 0 0
Total 21 121256 0 0.0001732

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.