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1:7880683 T / G


Filter Status
PASS
dbSNP
rs10462020
Allele Frequency
0.1662
Filtering AF
0.181 (European (Non-Finnish))
Allele Count
19998 / 120322
UCSC
1-7880683-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12194 66354 1194 0.1838
East Asian 67 8640 1 0.007755
Other 148 892 11 0.1659
African 938 10368 39 0.09047
Latino 2135 11466 206 0.1862
South Asian 2888 16012 269 0.1804
European (Finnish) 1628 6590 187 0.247
Total 19998 120322 1907 0.1662

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.