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1:7887579 C / G

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs228697
Allele Frequency
0.08667
Filtering AF
0.1044 (European (Non-Finnish))
Allele Count
10522 / 121408
UCSC
1-7887579-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7106 66738 382 0.1065
East Asian 403 8652 7 0.04658
Other 107 908 5 0.1178
African 195 10406 0 0.01874
Latino 683 11578 23 0.05899
South Asian 1522 16512 74 0.09218
European (Finnish) 506 6614 12 0.0765
Total 10522 121408 503 0.08667

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.