Interested in working on the development of this resource? Apply here.

1:94473287 G / A


Filter Status
PASS
dbSNP
rs28938473
Allele Frequency
0.002925
Filtering AF
0.00384 (European (Non-Finnish))
Allele Count
352 / 120336
UCSC
1-94473287-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 281 66138 1 0.004249
East Asian 0 8616 0 0
Other 4 898 0 0.004454
African 11 10140 0 0.001085
Latino 24 11506 0 0.002086
South Asian 27 16426 0 0.001644
European (Finnish) 5 6612 0 0.0007562
Total 352 120336 1 0.002925

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.