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10:101595996 T / A


Filter Status
PASS
dbSNP
rs17222723
Allele Frequency
0.04301
Filtering AF
0.0555 (European (Non-Finnish))
Allele Count
5221 / 121394
UCSC
10-101595996-T-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3805 66738 143 0.05701
East Asian 6 8654 0 0.0006933
Other 49 908 1 0.05396
African 583 10398 17 0.05607
Latino 347 11576 7 0.02998
South Asian 289 16506 4 0.01751
European (Finnish) 142 6614 3 0.02147
Total 5221 121394 175 0.04301

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.