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10:104596981 G / A


Filter Status
PASS
dbSNP
rs6162
Allele Frequency
0.4248
Filtering AF
0.5526 (East Asian)
Allele Count
51567 / 121396
UCSC
10-104596981-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 3 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 27307 66738 5549 0.4092
East Asian 4890 8642 1392 0.5658
Other 399 908 91 0.4394
African 3834 10406 693 0.3684
Latino 4728 11576 975 0.4084
South Asian 7910 16512 1925 0.479
European (Finnish) 2499 6614 456 0.3778
Total 51567 121396 11081 0.4248

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.