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10:105218252 A / G


Filter Status
PASS
dbSNP
rs2986017
Allele Frequency
0.7882
Filtering AF
0.9175 (African)
Allele Count
92568 / 117448
UCSC
10-105218252-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 2 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 46342 64148 16740 0.7224
East Asian 7554 8524 3358 0.8862
Other 703 880 285 0.7989
African 8965 9602 4187 0.9337
Latino 9630 11432 4049 0.8424
South Asian 14305 16486 6223 0.8677
European (Finnish) 5069 6376 2013 0.795
Total 92568 117448 36855 0.7882

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.