Interested in working on the development of this resource? Apply here.

10:115805056 G / C

Warning! This variant is found in phase with 10-115805057-G-T in 158 individuals, altering its functional interpretation
.

Filter Status
PASS
dbSNP
rs1801253
Allele Frequency
0.736
Filtering AF
0.8504 (Latino)
Allele Count
82606 / 112236
UCSC
10-115805056-G-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 44079 61014 15859 0.7224
East Asian 6262 8308 2361 0.7537
Other 604 828 222 0.7295
African 5041 8512 1482 0.5922
Latino 9684 11198 4201 0.8648
South Asian 12257 16110 4671 0.7608
European (Finnish) 4679 6266 1743 0.7467
Total 82606 112236 30539 0.736

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.