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10:121429393 C / T


Filter Status
PASS
dbSNP
rs387906874
Allele Frequency
0.0001236
Filtering AF
7e-05 (European (Non-Finnish))
Allele Count
15 / 121376
UCSC
10-121429393-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9 66712 0 0.0001349
East Asian 1 8654 0 0.0001156
Other 0 908 0 0
African 1 10400 0 9.615e-05
Latino 0 11576 0 0
South Asian 0 16512 0 0
European (Finnish) 4 6614 0 0.0006048
Total 15 121376 0 0.0001236

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.