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10:121429633 T / C

Warning! This variant is found in phase with 10-121429634-G-A in 3 individuals, altering its functional interpretation
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Filter Status
PASS
dbSNP
rs2234962
Allele Frequency
0.1767
Filtering AF
0.2184 (European (Non-Finnish))
Allele Count
21073 / 119230
UCSC
10-121429633-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 14456 65290 1572 0.2214
East Asian 10 8566 0 0.001167
Other 170 886 18 0.1919
African 383 9926 10 0.03859
Latino 1099 11528 54 0.09533
South Asian 3466 16436 397 0.2109
European (Finnish) 1489 6598 164 0.2257
Total 21073 119230 2215 0.1767

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.