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10:88441437 C / T


Filter Status
PASS
dbSNP
rs45487699
Allele Frequency
0.0005708
Filtering AF
0.000556 (European (Non-Finnish))
Allele Count
68 / 119136
UCSC
10-88441437-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 47 65318 0 0.0007196
East Asian 0 8584 0 0
Other 1 890 0 0.001124
African 0 9814 0 0
Latino 7 11544 0 0.0006064
South Asian 12 16382 0 0.0007325
European (Finnish) 1 6604 0 0.0001514
Total 68 119136 0 0.0005708

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.