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10:88459081 C / T


Filter Status
PASS
dbSNP
rs121908335
Allele Frequency
6.63e-05
Filtering AF
3e-05 (Latino)
Allele Count
8 / 120670
UCSC
10-88459081-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 5 66672 0 7.499e-05
East Asian 1 8622 0 0.000116
Other 0 900 0 0
African 0 9786 0 0
Latino 2 11568 0 0.0001729
South Asian 0 16508 0 0
European (Finnish) 0 6614 0 0
Total 8 120670 0 6.63e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.