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10:88477867 C / T


Filter Status
PASS
dbSNP
rs145983824
Allele Frequency
9.061e-05
Filtering AF
5.9e-05 (European (Non-Finnish))
Allele Count
11 / 121404
UCSC
10-88477867-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8 66734 0 0.0001199
East Asian 0 8654 0 0
Other 0 908 0 0
African 1 10404 0 9.612e-05
Latino 0 11578 0 0
South Asian 1 16512 0 6.056e-05
European (Finnish) 1 6614 0 0.0001512
Total 11 121404 0 9.061e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.