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10:90749256 G / A


Filter Status
PASS
dbSNP
rs2234767
Allele Frequency
0.1475
Filtering AF
0.4062 (East Asian)
Allele Count
16630 / 112738
UCSC
10-90749256-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 19 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 6877 61408 394 0.112
East Asian 3423 8192 714 0.4178
Other 116 842 7 0.1378
African 382 8150 13 0.04687
Latino 2066 11348 203 0.1821
South Asian 2932 16216 299 0.1808
European (Finnish) 834 6582 59 0.1267
Total 16630 112738 1689 0.1475

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.