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10:96535210 G / A


Filter Status
PASS
dbSNP
rs72552267
Allele Frequency
0.0002389
Filtering AF
0.000379 (East Asian)
Allele Count
29 / 121410
UCSC
10-96535210-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

missense
non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 19 66740 0 0.0002847
East Asian 7 8654 0 0.0008089
Other 0 908 0 0
African 0 10406 0 0
Latino 3 11576 0 0.0002592
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 29 121410 0 0.0002389

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.