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10:96541616 G / A


Filter Status
PASS
dbSNP
rs4244285
Allele Frequency
0.1856
Filtering AF
0.3324 (South Asian)
Allele Count
22168 / 119422
UCSC
10-96541616-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9751 65998 729 0.1477
East Asian 2676 8624 410 0.3103
Other 152 900 13 0.1689
African 1808 9990 174 0.181
Latino 1143 11340 59 0.1008
South Asian 5437 15994 947 0.3399
European (Finnish) 1201 6576 122 0.1826
Total 22168 119422 2454 0.1856

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.