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10:96709038 GA / G


Filter Status
PASS
dbSNP
rs9332131
Allele Frequency
0.000945
Filtering AF
0.008884 (African)
Allele Count
114 / 120632
UCSC
10-96709038-GA-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

frameshift
non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 66436 0 3.01e-05
East Asian 0 8528 0 0
Other 0 904 0 0
African 108 10298 1 0.01049
Latino 4 11398 0 0.0003509
South Asian 0 16490 0 0
European (Finnish) 0 6578 0 0
Total 114 120632 1 0.000945

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.