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10:96798749 T / C


Filter Status
PASS
dbSNP
rs10509681
Allele Frequency
0.08263
Filtering AF
0.1111 (European (Non-Finnish))
Allele Count
10028 / 121366
UCSC
10-96798749-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7555 66724 449 0.1132
East Asian 3 8652 0 0.0003467
Other 87 908 3 0.09581
African 218 10404 1 0.02095
Latino 769 11562 27 0.06651
South Asian 655 16506 16 0.03968
European (Finnish) 741 6610 48 0.1121
Total 10028 121366 544 0.08263

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.