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10:96827030 C / T


Filter Status
PASS
dbSNP
rs11572080
Allele Frequency
0.08256
Filtering AF
0.111 (European (Non-Finnish))
Allele Count
10022 / 121390
UCSC
10-96827030-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7549 66740 449 0.1131
East Asian 3 8654 0 0.0003467
Other 87 908 3 0.09581
African 218 10406 1 0.02095
Latino 769 11556 27 0.06655
South Asian 655 16512 16 0.03967
European (Finnish) 741 6614 48 0.112
Total 10022 121390 544 0.08256

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.