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11:102398593 C / T


Filter Status
PASS
dbSNP
rs10502001
Allele Frequency
0.1854
Filtering AF
0.2424 (East Asian)
Allele Count
22491 / 121326
UCSC
11-102398593-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

missense
non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 14875 66714 1619 0.223
East Asian 2171 8644 271 0.2512
Other 166 908 22 0.1828
African 453 10376 15 0.04366
Latino 1827 11566 156 0.158
South Asian 1511 16506 83 0.09154
European (Finnish) 1488 6612 133 0.225
Total 22491 121326 2299 0.1854

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.