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11:108143456 C / G


Filter Status
PASS
dbSNP
rs1800057
Allele Frequency
0.01692
Filtering AF
0.02513 (European (Non-Finnish))
Allele Count
2046 / 120956
UCSC
11-108143456-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1740 66522 27 0.02616
East Asian 0 8594 0 0
Other 16 902 1 0.01774
African 51 10320 0 0.004942
Latino 102 11528 1 0.008848
South Asian 83 16488 1 0.005034
European (Finnish) 54 6602 0 0.008179
Total 2046 120956 30 0.01692

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.