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11:113270828 G / A


Filter Status
PASS
dbSNP
rs1800497
Allele Frequency
0.2759
Filtering AF
0.4782 (Latino)
Allele Count
30556 / 110734
UCSC
11-113270828-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12188 60502 1129 0.2014
East Asian 3412 7990 687 0.427
Other 172 798 13 0.2155
African 3324 8954 569 0.3712
Latino 5277 10786 1280 0.4892
South Asian 4760 15634 762 0.3045
European (Finnish) 1423 6070 142 0.2344
Total 30556 110734 4582 0.2759

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.