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11:118534082 C / T

Warning! This variant is only covered in 31495 individuals (adjusted allele number = 62990).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.

Filter Status
Allele Frequency
Filtering AF
0.3708 (South Asian)
Allele Count
19385 / 62990
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.


This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10562 34470 1043 0.3064
East Asian 1606 4696 173 0.342
Other 144 500 20 0.288
African 381 4528 15 0.08414
Latino 1599 4662 136 0.343
South Asian 4044 10626 706 0.3806
European (Finnish) 1049 3508 101 0.299
Total 19385 62990 2194 0.3077

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.