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11:17417158 G / A


Warning! This variant is only covered in 10631 individuals (adjusted allele number = 21262).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs193922402
Allele Frequency
4.703e-05
Filtering AF
0 (None)
Allele Count
1 / 21262
UCSC
11-17417158-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 9272 0 0.0001079
East Asian 0 668 0 0
Other 0 206 0 0
African 0 2770 0 0
Latino 0 392 0 0
South Asian 0 7912 0 0
European (Finnish) 0 42 0 0
Total 1 21262 0 4.703e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.