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11:17519742 C / G


Filter Status
PASS
dbSNP
rs1064074
Allele Frequency
0.4875
Filtering AF
0.545 (European (Non-Finnish))
Allele Count
59175 / 121392
UCSC
11-17519742-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 36683 66734 10035 0.5497
East Asian 2651 8642 415 0.3068
Other 446 908 112 0.4912
African 4383 10404 925 0.4213
Latino 4090 11578 732 0.3533
South Asian 7424 16512 1698 0.4496
European (Finnish) 3498 6614 940 0.5289
Total 59175 121392 14857 0.4875

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.