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11:47469631 G / T


Filter Status
PASS
dbSNP
rs104894299
Allele Frequency
0.001591
Filtering AF
0.002137 (European (Non-Finnish))
Allele Count
192 / 120660
UCSC
11-47469631-G-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 162 66262 0 0.002445
East Asian 0 8638 0 0
Other 1 896 0 0.001116
African 2 10318 0 0.0001938
Latino 9 11520 0 0.0007813
South Asian 13 16488 0 0.0007885
European (Finnish) 5 6538 0 0.0007648
Total 192 120660 0 0.001591

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.