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11:47470476 A / G


Filter Status
PASS
dbSNP
rs104894300
Allele Frequency
1.648e-05
Filtering AF
5e-06 (European (Non-Finnish))
Allele Count
2 / 121334
UCSC
11-47470476-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 66674 0 3e-05
East Asian 0 8654 0 0
Other 0 906 0 0
African 0 10404 0 0
Latino 0 11576 0 0
South Asian 0 16512 0 0
European (Finnish) 0 6608 0 0
Total 2 121334 0 1.648e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.